Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Reep4-203ENSMUST00000226563 1444 ntBASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vcpip1Q8CDG3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Gm42642-201ENSMUST00000200683 355 ntBASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vcpip1Q8CDG3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vcpip1Q8CDG3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vcpip1Q8CDG3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
Vcpip1Q8CDG3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Gm13534-201ENSMUST00000121169 513 ntBASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vcpip1Q8CDG3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vcpip1Q8CDG3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Gm37179-201ENSMUST00000194862 823 ntBASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vcpip1Q8CDG3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms