Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Prpf31Q8CCF0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Prpf31Q8CCF0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.02■□□□□ 0.8
Prpf31Q8CCF0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.02■□□□□ 0.8
Prpf31Q8CCF0 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.02■□□□□ 0.8
Prpf31Q8CCF0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf31Q8CCF0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf31Q8CCF0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Prpf31Q8CCF0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf31Q8CCF0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Prpf31Q8CCF0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Prpf31Q8CCF0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Prpf31Q8CCF0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Gm5643-201ENSMUST00000117081 966 ntBASIC20■□□□□ 0.79
Prpf31Q8CCF0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20■□□□□ 0.79
Prpf31Q8CCF0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Prpf31Q8CCF0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Prpf31Q8CCF0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Flg-201ENSMUST00000050758 1488 ntBASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Prpf31Q8CCF0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Prpf31Q8CCF0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms