Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Gm7860-201ENSMUST00000121190 879 ntBASIC17.69■□□□□ 0.42
SynpoQ8CC35 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SynpoQ8CC35 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.68■□□□□ 0.42
SynpoQ8CC35 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.68■□□□□ 0.42
SynpoQ8CC35 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SynpoQ8CC35 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.67■□□□□ 0.42
SynpoQ8CC35 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Gm5408-201ENSMUST00000197998 747 ntBASIC17.67■□□□□ 0.42
SynpoQ8CC35 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Gm4968-201ENSMUST00000071458 858 ntBASIC17.67■□□□□ 0.42
SynpoQ8CC35 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SynpoQ8CC35 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
SynpoQ8CC35 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SynpoQ8CC35 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SynpoQ8CC35 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.64■□□□□ 0.41
SynpoQ8CC35 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SynpoQ8CC35 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynpoQ8CC35 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynpoQ8CC35 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SynpoQ8CC35 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SynpoQ8CC35 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms