Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc46a2Q8CA03 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Slc46a2Q8CA03 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Slc46a2Q8CA03 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc46a2Q8CA03 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Slc46a2Q8CA03 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Slc46a2Q8CA03 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Gm11421-201ENSMUST00000122124 294 ntBASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Smad6-203ENSMUST00000179458 273 ntBASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc46a2Q8CA03 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc46a2Q8CA03 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Tgds-204ENSMUST00000228543 1594 ntBASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc46a2Q8CA03 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc46a2Q8CA03 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Gm12821-201ENSMUST00000120022 600 ntBASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc46a2Q8CA03 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc46a2Q8CA03 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms