Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim9Q8C7M3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim9Q8C7M3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim9Q8C7M3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim9Q8C7M3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim9Q8C7M3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim9Q8C7M3 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim9Q8C7M3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim9Q8C7M3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Fst-202ENSMUST00000223640 2612 ntBASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.21■□□□□ 0.83
Trim9Q8C7M3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim9Q8C7M3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gm7290-201ENSMUST00000104990 617 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gm12918-201ENSMUST00000120234 636 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gm15710-201ENSMUST00000121821 636 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gm5075-201ENSMUST00000196916 622 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim9Q8C7M3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Gm7291-201ENSMUST00000199147 382 ntBASIC20.19■□□□□ 0.82
Trim9Q8C7M3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim9Q8C7M3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Gm6211-202ENSMUST00000167849 925 ntBASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim9Q8C7M3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Tgds-204ENSMUST00000228543 1594 ntBASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms