Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ccdc60Q8C4J0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ccdc60Q8C4J0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Ccdc60Q8C4J0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ccdc60Q8C4J0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ccdc60Q8C4J0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Rab3c-203ENSMUST00000224180 967 ntBASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ccdc60Q8C4J0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc60Q8C4J0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc60Q8C4J0 Gm22325-201ENSMUST00000158904 308 ntBASIC23.37■■□□□ 1.33
Ccdc60Q8C4J0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC23.37■■□□□ 1.33
Ccdc60Q8C4J0 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.37■■□□□ 1.33
Ccdc60Q8C4J0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ccdc60Q8C4J0 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 Gm4968-201ENSMUST00000071458 858 ntBASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ccdc60Q8C4J0 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ccdc60Q8C4J0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Gm38308-201ENSMUST00000194934 1809 ntBASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ccdc60Q8C4J0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.33■■□□□ 1.33
Ccdc60Q8C4J0 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.33■■□□□ 1.32
Ccdc60Q8C4J0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ccdc60Q8C4J0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc60Q8C4J0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.3■■□□□ 1.32
Ccdc60Q8C4J0 Gm44549-201ENSMUST00000208351 577 ntBASIC23.3■■□□□ 1.32
Ccdc60Q8C4J0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ccdc60Q8C4J0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc60Q8C4J0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc60Q8C4J0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Ccdc60Q8C4J0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ccdc60Q8C4J0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC23.29■■□□□ 1.32
Ccdc60Q8C4J0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms