Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smim4Q8C1Q6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.34■□□□□ 0.05
Smim4Q8C1Q6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Smim4Q8C1Q6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim4Q8C1Q6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim4Q8C1Q6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim4Q8C1Q6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim4Q8C1Q6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim4Q8C1Q6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smim4Q8C1Q6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smim4Q8C1Q6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms