Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Gm15039-201ENSMUST00000118914 875 ntBASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Gm6365-201ENSMUST00000054711 744 ntBASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trub1Q8C0D0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trub1Q8C0D0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.89■□□□□ 0.62
Trub1Q8C0D0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Gm22325-201ENSMUST00000158904 308 ntBASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trub1Q8C0D0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trub1Q8C0D0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Gm27405-201ENSMUST00000184201 112 ntBASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trub1Q8C0D0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Trub1Q8C0D0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.85■□□□□ 0.61
Trub1Q8C0D0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trub1Q8C0D0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trub1Q8C0D0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms