Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp398Q8BV16 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp398Q8BV16 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Zfp398Q8BV16 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Gm13146-201ENSMUST00000118508 780 ntBASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Zfp398Q8BV16 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Zfp398Q8BV16 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Zfp398Q8BV16 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.38■□□□□ 0.53
Zfp398Q8BV16 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Zfp398Q8BV16 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Zfp398Q8BV16 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Zfp398Q8BV16 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Gm13534-201ENSMUST00000121169 513 ntBASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Zfp398Q8BV16 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms