Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Fam43aQ8BUP8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fam43aQ8BUP8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Fam43aQ8BUP8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fam43aQ8BUP8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fam43aQ8BUP8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Fam43aQ8BUP8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fam43aQ8BUP8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Gm43598-201ENSMUST00000202482 2479 ntBASIC20.26■□□□□ 0.83
Fam43aQ8BUP8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fam43aQ8BUP8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms