Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Gm12251-201ENSMUST00000117893 792 ntBASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Gm8969-201ENSMUST00000199694 526 ntBASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf7Q8BTV2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf7Q8BTV2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf7Q8BTV2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Cpsf7Q8BTV2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Gm27801-201ENSMUST00000184174 223 ntBASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf7Q8BTV2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf7Q8BTV2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cpsf7Q8BTV2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Cpsf7Q8BTV2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf7Q8BTV2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf7Q8BTV2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms