Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lig4Q8BTF7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Gm2399-201ENSMUST00000104944 225 ntBASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Trmt13-210ENSMUST00000198454 880 ntBASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lig4Q8BTF7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lig4Q8BTF7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lig4Q8BTF7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Gm27275-201ENSMUST00000184318 272 ntBASIC19.38■□□□□ 0.69
Lig4Q8BTF7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lig4Q8BTF7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Dio3-201ENSMUST00000097228 1449 ntBASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lig4Q8BTF7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lig4Q8BTF7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lig4Q8BTF7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lig4Q8BTF7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms