Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cpne3Q8BT60 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cpne3Q8BT60 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cpne3Q8BT60 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cpne3Q8BT60 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Reep4-203ENSMUST00000226563 1444 ntBASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cpne3Q8BT60 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpne3Q8BT60 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cpne3Q8BT60 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cpne3Q8BT60 Rarb-207ENSMUST00000225921 2756 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms