Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 Gm10653-202ENSMUST00000139570 835 ntBASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 Gm6211-202ENSMUST00000167849 925 ntBASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip4Q8BQP8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rab11fip4Q8BQP8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Rab11fip4Q8BQP8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rab11fip4Q8BQP8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Rab11fip4Q8BQP8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.25■□□□□ 0.83
Rab11fip4Q8BQP8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Gm20760-201ENSMUST00000179197 648 ntBASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab11fip4Q8BQP8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab11fip4Q8BQP8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rab11fip4Q8BQP8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.21■□□□□ 0.83
Rab11fip4Q8BQP8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms