Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col16a1Q8BLX7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Col16a1Q8BLX7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col16a1Q8BLX7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC24.31■■□□□ 1.48
Col16a1Q8BLX7 Gm15853-202ENSMUST00000195518 2041 ntBASIC24.31■■□□□ 1.48
Col16a1Q8BLX7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Col16a1Q8BLX7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Col16a1Q8BLX7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC24.3■■□□□ 1.48
Col16a1Q8BLX7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Gm20634-201ENSMUST00000090779 2956 ntBASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 AC166341.7-201ENSMUST00000221698 126 ntBASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col16a1Q8BLX7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC24.28■■□□□ 1.48
Col16a1Q8BLX7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col16a1Q8BLX7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC24.28■■□□□ 1.48
Col16a1Q8BLX7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Col16a1Q8BLX7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Col16a1Q8BLX7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Gm18959-201ENSMUST00000208954 655 ntBASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Col16a1Q8BLX7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Gm33142-201ENSMUST00000193913 867 ntBASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Gm10654-201ENSMUST00000098653 1633 ntBASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Col16a1Q8BLX7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Gm10013-201ENSMUST00000106074 672 ntBASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 AC159205.6-201ENSMUST00000224935 887 ntBASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Col16a1Q8BLX7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col16a1Q8BLX7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Col16a1Q8BLX7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC24.23■■□□□ 1.47
Col16a1Q8BLX7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col16a1Q8BLX7 Hsf1-204ENSMUST00000226872 2104 ntBASIC24.23■■□□□ 1.47
Col16a1Q8BLX7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Col16a1Q8BLX7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Col16a1Q8BLX7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC24.22■■□□□ 1.47
Col16a1Q8BLX7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col16a1Q8BLX7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col16a1Q8BLX7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col16a1Q8BLX7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Col16a1Q8BLX7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Col16a1Q8BLX7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 AA414768-201ENSMUST00000121924 1257 ntBASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Gm45058-201ENSMUST00000205810 766 ntBASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Col16a1Q8BLX7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms