Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim23Q8BGX0 Dio3-201ENSMUST00000097228 1449 ntBASIC17.66■□□□□ 0.42
Trim23Q8BGX0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim23Q8BGX0 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.66■□□□□ 0.42
Trim23Q8BGX0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim23Q8BGX0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim23Q8BGX0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim23Q8BGX0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim23Q8BGX0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Trim23Q8BGX0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Gm2559-201ENSMUST00000201323 363 ntBASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim23Q8BGX0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim23Q8BGX0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Gm2399-201ENSMUST00000104944 225 ntBASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Gm27011-201ENSMUST00000182352 972 ntBASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Gm37856-201ENSMUST00000191634 999 ntBASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim23Q8BGX0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms