Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim6Q8BGE7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim6Q8BGE7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Smad6-203ENSMUST00000179458 273 ntBASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trim6Q8BGE7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim6Q8BGE7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Gm27801-201ENSMUST00000184174 223 ntBASIC19.42■□□□□ 0.7
Trim6Q8BGE7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim6Q8BGE7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim6Q8BGE7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim6Q8BGE7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim6Q8BGE7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms