Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Gm38308-201ENSMUST00000194934 1809 ntBASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Gm18688-201ENSMUST00000204695 1859 ntBASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Limd2Q8BGB5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Limd2Q8BGB5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC10.02□□□□□ -0.8
Limd2Q8BGB5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Limd2Q8BGB5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Limd2Q8BGB5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Limd2Q8BGB5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Limd2Q8BGB5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Limd2Q8BGB5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Fcho2-208ENSMUST00000224992 2964 ntBASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Limd2Q8BGB5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms