Protein–RNA interactions for Protein: Q80XU8

Lrfn4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn4Q80XU8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrfn4Q80XU8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.22■□□□□ 0.19
Lrfn4Q80XU8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrfn4Q80XU8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Gm27405-201ENSMUST00000184201 112 ntBASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Gm6365-201ENSMUST00000054711 744 ntBASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrfn4Q80XU8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrfn4Q80XU8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Lrfn4Q80XU8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrfn4Q80XU8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Lrfn4Q80XU8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrfn4Q80XU8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrfn4Q80XU8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrfn4Q80XU8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lrfn4Q80XU8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrfn4Q80XU8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrfn4Q80XU8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lrfn4Q80XU8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrfn4Q80XU8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrfn4Q80XU8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrfn4Q80XU8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrfn4Q80XU8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms