Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.55■□□□□ 0.56
Nrde2Q80XC6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nrde2Q80XC6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nrde2Q80XC6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Gm13158-201ENSMUST00000122007 736 ntBASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Gm10698-201ENSMUST00000182663 604 ntBASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nrde2Q80XC6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Gm15565-201ENSMUST00000118890 427 ntBASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Gm37055-201ENSMUST00000191866 133 ntBASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nrde2Q80XC6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nrde2Q80XC6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nrde2Q80XC6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nrde2Q80XC6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nrde2Q80XC6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nrde2Q80XC6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nrde2Q80XC6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Nrde2Q80XC6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nrde2Q80XC6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.49■□□□□ 0.55
Nrde2Q80XC6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nrde2Q80XC6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nrde2Q80XC6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nrde2Q80XC6 Mir1199-201ENSMUST00000117015 119 ntBASIC18.49■□□□□ 0.55
Nrde2Q80XC6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nrde2Q80XC6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nrde2Q80XC6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.49■□□□□ 0.55
Nrde2Q80XC6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms