Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Gm18025-201ENSMUST00000221733 862 ntBASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp6nlQ80XC3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Gm15375-201ENSMUST00000119510 849 ntBASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Gm38285-201ENSMUST00000192928 922 ntBASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp6nlQ80XC3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp6nlQ80XC3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Usp6nlQ80XC3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp6nlQ80XC3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Gm42545-201ENSMUST00000202755 922 ntBASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.25■□□□□ 0.83
Usp6nlQ80XC3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Gm37292-201ENSMUST00000192062 758 ntBASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp6nlQ80XC3 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp6nlQ80XC3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp6nlQ80XC3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp6nlQ80XC3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms