Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prpf40bQ80W14 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.1■□□□□ 0.97
Prpf40bQ80W14 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prpf40bQ80W14 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Gm21362-201ENSMUST00000194272 928 ntBASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.09■□□□□ 0.97
Prpf40bQ80W14 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prpf40bQ80W14 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prpf40bQ80W14 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf40bQ80W14 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Prpf40bQ80W14 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Gm2399-201ENSMUST00000104944 225 ntBASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Gm6433-201ENSMUST00000118634 875 ntBASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prpf40bQ80W14 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.06■□□□□ 0.96
Prpf40bQ80W14 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Gm44549-201ENSMUST00000208351 577 ntBASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.06■□□□□ 0.96
Prpf40bQ80W14 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.05■□□□□ 0.96
Prpf40bQ80W14 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.05■□□□□ 0.96
Prpf40bQ80W14 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Gm43799-201ENSMUST00000201845 579 ntBASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Prpf40bQ80W14 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prpf40bQ80W14 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms