Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpp38Q80UU2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp38Q80UU2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp38Q80UU2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpp38Q80UU2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpp38Q80UU2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpp38Q80UU2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Gm26524-201ENSMUST00000192339 390 ntBASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rpp38Q80UU2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpp38Q80UU2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpp38Q80UU2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpp38Q80UU2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpp38Q80UU2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.27■□□□□ 0.51
Rpp38Q80UU2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpp38Q80UU2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpp38Q80UU2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpp38Q80UU2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rpp38Q80UU2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rpp38Q80UU2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms