Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm18959-201ENSMUST00000208954 655 ntBASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rpap1Q80TE0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Mir2861-201ENSMUST00000175539 82 ntBASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Gm6345-202ENSMUST00000180900 204 ntBASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Notumos-201ENSMUST00000151998 2659 ntBASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rpap1Q80TE0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Gm44544-201ENSMUST00000207052 1844 ntBASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
Rpap1Q80TE0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rpap1Q80TE0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Rpap1Q80TE0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Rpap1Q80TE0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rpap1Q80TE0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rpap1Q80TE0 Gm10013-201ENSMUST00000106074 672 ntBASIC28.58■■■□□ 2.17
Rpap1Q80TE0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rpap1Q80TE0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Gm10654-201ENSMUST00000098653 1633 ntBASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rpap1Q80TE0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC28.56■■■□□ 2.16
Rpap1Q80TE0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rpap1Q80TE0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Rpap1Q80TE0 Gm18688-201ENSMUST00000204695 1859 ntBASIC28.56■■■□□ 2.16
Rpap1Q80TE0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rpap1Q80TE0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rpap1Q80TE0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rpap1Q80TE0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Gm33142-201ENSMUST00000193913 867 ntBASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rpap1Q80TE0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rpap1Q80TE0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rpap1Q80TE0 AA414768-201ENSMUST00000121924 1257 ntBASIC28.52■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms