Protein–RNA interactions for Protein: Q7TND5

Rpf1, Ribosome production factor 1, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1Q7TND5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpf1Q7TND5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Gm10653-202ENSMUST00000139570 835 ntBASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.73■□□□□ 0.75
Rpf1Q7TND5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpf1Q7TND5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Gm12896-201ENSMUST00000118430 226 ntBASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpf1Q7TND5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpf1Q7TND5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.7■□□□□ 0.74
Rpf1Q7TND5 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Gm37856-201ENSMUST00000191634 999 ntBASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpf1Q7TND5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Gm20760-201ENSMUST00000179197 648 ntBASIC19.68■□□□□ 0.74
Rpf1Q7TND5 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rpf1Q7TND5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Dio3-201ENSMUST00000097228 1449 ntBASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.67■□□□□ 0.74
Rpf1Q7TND5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Gm27275-201ENSMUST00000184318 272 ntBASIC19.66■□□□□ 0.74
Rpf1Q7TND5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Trmt13-210ENSMUST00000198454 880 ntBASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rpf1Q7TND5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms