Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Gm38205-201ENSMUST00000192243 258 ntBASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Gm7291-201ENSMUST00000199147 382 ntBASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Casc1Q6TDU8 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Casc1Q6TDU8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Casc1Q6TDU8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Casc1Q6TDU8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Casc1Q6TDU8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Casc1Q6TDU8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.83■■□□□ 1.08
Casc1Q6TDU8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Casc1Q6TDU8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Casc1Q6TDU8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.8■■□□□ 1.08
Casc1Q6TDU8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Casc1Q6TDU8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Gm7860-201ENSMUST00000121190 879 ntBASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Casc1Q6TDU8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Gm13146-201ENSMUST00000118508 780 ntBASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Casc1Q6TDU8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms