Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nup98Q6PFD9 BC021767-201ENSMUST00000126387 1716 ntBASIC21.79■■□□□ 1.08
Nup98Q6PFD9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nup98Q6PFD9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nup98Q6PFD9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nup98Q6PFD9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.76■■□□□ 1.07
Nup98Q6PFD9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Timm23-208ENSMUST00000226683 750 ntBASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nup98Q6PFD9 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nup98Q6PFD9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.74■■□□□ 1.07
Nup98Q6PFD9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nup98Q6PFD9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nup98Q6PFD9 Gm11643-201ENSMUST00000119578 864 ntBASIC21.71■■□□□ 1.07
Nup98Q6PFD9 Gm7977-201ENSMUST00000193787 748 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms