Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rnf220Q6PDX6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rnf220Q6PDX6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf220Q6PDX6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rnf220Q6PDX6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf220Q6PDX6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.33■□□□□ 0.36
Rnf220Q6PDX6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf220Q6PDX6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rnf220Q6PDX6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf220Q6PDX6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rnf220Q6PDX6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf220Q6PDX6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Dancr-204ENSMUST00000132389 2347 ntBASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf220Q6PDX6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms