Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chd4Q6PDQ2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Gm43545-201ENSMUST00000196765 2779 ntBASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Gm11539-201ENSMUST00000119837 557 ntBASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Gm13436-201ENSMUST00000120418 567 ntBASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Chd4Q6PDQ2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Gm10654-201ENSMUST00000098653 1633 ntBASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Chd4Q6PDQ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC24.14■■□□□ 1.46
Chd4Q6PDQ2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chd4Q6PDQ2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chd4Q6PDQ2 Gm30025-201ENSMUST00000218555 728 ntBASIC24.14■■□□□ 1.46
Chd4Q6PDQ2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC24.14■■□□□ 1.46
Chd4Q6PDQ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Chd4Q6PDQ2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Chd4Q6PDQ2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chd4Q6PDQ2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chd4Q6PDQ2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Chd4Q6PDQ2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC24.13■■□□□ 1.45
Chd4Q6PDQ2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chd4Q6PDQ2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Chd4Q6PDQ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Odf3b-204ENSMUST00000227834 930 ntBASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Gm9194-201ENSMUST00000220749 1447 ntBASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Chd4Q6PDQ2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC24.11■■□□□ 1.45
Chd4Q6PDQ2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Chd4Q6PDQ2 Gm13559-201ENSMUST00000120476 863 ntBASIC24.11■■□□□ 1.45
Chd4Q6PDQ2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Chd4Q6PDQ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC24.11■■□□□ 1.45
Chd4Q6PDQ2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Gm38345-201ENSMUST00000192635 1748 ntBASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Chd4Q6PDQ2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Chd4Q6PDQ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Chd4Q6PDQ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Chd4Q6PDQ2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC24.08■■□□□ 1.45
Chd4Q6PDQ2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC24.08■■□□□ 1.45
Chd4Q6PDQ2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms