Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Snx6Q6P8X1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.52■□□□□ 0.39
Snx6Q6P8X1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx6Q6P8X1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Snx6Q6P8X1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Gm18671-201ENSMUST00000214826 683 ntBASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Gm5874-201ENSMUST00000096101 508 ntBASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Snx6Q6P8X1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Grk6-206ENSMUST00000224995 2971 ntBASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Snx6Q6P8X1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Snx6Q6P8X1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Gm42642-201ENSMUST00000200683 355 ntBASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Snx6Q6P8X1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Gm10033-202ENSMUST00000211874 928 ntBASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx6Q6P8X1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.46■□□□□ 0.39
Snx6Q6P8X1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms