Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Krt39Q6IFX4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Krt39Q6IFX4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Krt39Q6IFX4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Krt39Q6IFX4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Krt39Q6IFX4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.21■□□□□ 0.83
Krt39Q6IFX4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
Krt39Q6IFX4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Krt39Q6IFX4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Krt39Q6IFX4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Krt39Q6IFX4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Krt39Q6IFX4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt39Q6IFX4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.17■□□□□ 0.82
Krt39Q6IFX4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt39Q6IFX4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt39Q6IFX4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Krt39Q6IFX4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms