Protein–RNA interactions for Protein: Q6IE28

Gm5416, Predicted gene 5416, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5416Q6IE28 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5416Q6IE28 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.12■□□□□ 0.33
Gm5416Q6IE28 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.12■□□□□ 0.33
Gm5416Q6IE28 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.12■□□□□ 0.33
Gm5416Q6IE28 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5416Q6IE28 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Gm13234-201ENSMUST00000120010 747 ntBASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Gm10493-201ENSMUST00000097270 612 ntBASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.11■□□□□ 0.33
Gm5416Q6IE28 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5416Q6IE28 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5416Q6IE28 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5416Q6IE28 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5416Q6IE28 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm5416Q6IE28 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm5416Q6IE28 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms