Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkp4Q68FH0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkp4Q68FH0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkp4Q68FH0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pkp4Q68FH0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.54■□□□□ 0.4
Pkp4Q68FH0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pkp4Q68FH0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.53■□□□□ 0.4
Pkp4Q68FH0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkp4Q68FH0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pkp4Q68FH0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Gm18671-201ENSMUST00000214826 683 ntBASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Pkp4Q68FH0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pkp4Q68FH0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Gm42642-201ENSMUST00000200683 355 ntBASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Gm10033-202ENSMUST00000211874 928 ntBASIC17.49■□□□□ 0.39
Pkp4Q68FH0 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Gm5874-201ENSMUST00000096101 508 ntBASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkp4Q68FH0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Gm7514-201ENSMUST00000209475 934 ntBASIC17.48■□□□□ 0.39
Pkp4Q68FH0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pkp4Q68FH0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms