Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctnna3Q65CL1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ctnna3Q65CL1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctnna3Q65CL1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctnna3Q65CL1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctnna3Q65CL1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Ctnna3Q65CL1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ctnna3Q65CL1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctnna3Q65CL1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Ctnna3Q65CL1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctnna3Q65CL1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ctnna3Q65CL1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ctnna3Q65CL1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctnna3Q65CL1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctnna3Q65CL1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ctnna3Q65CL1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ctnna3Q65CL1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctnna3Q65CL1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctnna3Q65CL1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ctnna3Q65CL1 Gm6211-202ENSMUST00000167849 925 ntBASIC20.52■□□□□ 0.88
Ctnna3Q65CL1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.52■□□□□ 0.88
Ctnna3Q65CL1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms