Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.3■□□□□ 0.04
Commd3Q63829 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.3■□□□□ 0.04
Commd3Q63829 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Commd3Q63829 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Commd3Q63829 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Commd3Q63829 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Commd3Q63829 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Commd3Q63829 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.29■□□□□ 0.04
Commd3Q63829 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Commd3Q63829 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Commd3Q63829 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.28■□□□□ 0.04
Commd3Q63829 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Commd3Q63829 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Commd3Q63829 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Commd3Q63829 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Commd3Q63829 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.27■□□□□ 0.04
Commd3Q63829 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Commd3Q63829 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Commd3Q63829 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Commd3Q63829 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Commd3Q63829 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Commd3Q63829 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Commd3Q63829 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Commd3Q63829 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Commd3Q63829 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Commd3Q63829 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.26■□□□□ 0.03
Commd3Q63829 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Commd3Q63829 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Commd3Q63829 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Commd3Q63829 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Commd3Q63829 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Commd3Q63829 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Commd3Q63829 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Commd3Q63829 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.24■□□□□ 0.03
Commd3Q63829 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Commd3Q63829 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Commd3Q63829 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Commd3Q63829 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.24■□□□□ 0.03
Commd3Q63829 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.24■□□□□ 0.03
Commd3Q63829 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms