Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Six3Q62233 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Six3Q62233 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.91■□□□□ 0.46
Six3Q62233 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.91■□□□□ 0.46
Six3Q62233 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Six3Q62233 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.91■□□□□ 0.46
Six3Q62233 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
Six3Q62233 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six3Q62233 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Six3Q62233 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.9■□□□□ 0.46
Six3Q62233 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.9■□□□□ 0.46
Six3Q62233 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.9■□□□□ 0.46
Six3Q62233 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.9■□□□□ 0.46
Six3Q62233 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.9■□□□□ 0.46
Six3Q62233 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Six3Q62233 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six3Q62233 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Six3Q62233 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Six3Q62233 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Six3Q62233 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six3Q62233 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six3Q62233 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six3Q62233 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.89■□□□□ 0.45
Six3Q62233 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.89■□□□□ 0.45
Six3Q62233 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.89■□□□□ 0.45
Six3Q62233 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Six3Q62233 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six3Q62233 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Six3Q62233 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Six3Q62233 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.89■□□□□ 0.45
Six3Q62233 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six3Q62233 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.88■□□□□ 0.45
Six3Q62233 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six3Q62233 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six3Q62233 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.88■□□□□ 0.45
Six3Q62233 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six3Q62233 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Six3Q62233 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Six3Q62233 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Six3Q62233 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Six3Q62233 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six3Q62233 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.87■□□□□ 0.45
Six3Q62233 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six3Q62233 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Six3Q62233 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Six3Q62233 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.86■□□□□ 0.45
Six3Q62233 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.86■□□□□ 0.45
Six3Q62233 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six3Q62233 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Six3Q62233 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six3Q62233 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.85■□□□□ 0.45
Six3Q62233 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Six3Q62233 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six3Q62233 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.85■□□□□ 0.45
Six3Q62233 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six3Q62233 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six3Q62233 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six3Q62233 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six3Q62233 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.85■□□□□ 0.45
Six3Q62233 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six3Q62233 Gm42778-201ENSMUST00000199644 553 ntBASIC17.84■□□□□ 0.45
Six3Q62233 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms