Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Tgds-204ENSMUST00000228543 1594 ntBASIC19.58■□□□□ 0.73
Six2Q62232 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Six2Q62232 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Six2Q62232 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Six2Q62232 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Six2Q62232 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.58■□□□□ 0.72
Six2Q62232 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Six2Q62232 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six2Q62232 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Six2Q62232 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Six2Q62232 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Gm22325-201ENSMUST00000158904 308 ntBASIC19.57■□□□□ 0.72
Six2Q62232 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.57■□□□□ 0.72
Six2Q62232 Gm8495-201ENSMUST00000188740 694 ntBASIC19.57■□□□□ 0.72
Six2Q62232 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.57■□□□□ 0.72
Six2Q62232 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Six2Q62232 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Six2Q62232 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Six2Q62232 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.56■□□□□ 0.72
Six2Q62232 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six2Q62232 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six2Q62232 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six2Q62232 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six2Q62232 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six2Q62232 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Six2Q62232 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.55■□□□□ 0.72
Six2Q62232 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six2Q62232 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Six2Q62232 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six2Q62232 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six2Q62232 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six2Q62232 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six2Q62232 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Six2Q62232 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.54■□□□□ 0.72
Six2Q62232 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.54■□□□□ 0.72
Six2Q62232 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Six2Q62232 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six2Q62232 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.54■□□□□ 0.72
Six2Q62232 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.53■□□□□ 0.72
Six2Q62232 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.53■□□□□ 0.72
Six2Q62232 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.53■□□□□ 0.72
Six2Q62232 Gm42569-201ENSMUST00000200539 472 ntBASIC19.53■□□□□ 0.72
Six2Q62232 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.53■□□□□ 0.72
Six2Q62232 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six2Q62232 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six2Q62232 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Six2Q62232 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six2Q62232 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.52■□□□□ 0.72
Six2Q62232 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six2Q62232 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six2Q62232 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six2Q62232 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six2Q62232 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six2Q62232 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six2Q62232 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six2Q62232 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.51■□□□□ 0.71
Six2Q62232 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Six2Q62232 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms