Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SspnQ62147 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SspnQ62147 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SspnQ62147 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SspnQ62147 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SspnQ62147 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SspnQ62147 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SspnQ62147 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SspnQ62147 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.31■□□□□ 0.04
SspnQ62147 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SspnQ62147 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.3■□□□□ 0.04
SspnQ62147 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.3■□□□□ 0.04
SspnQ62147 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.3■□□□□ 0.04
SspnQ62147 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SspnQ62147 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SspnQ62147 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.3■□□□□ 0.04
SspnQ62147 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SspnQ62147 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.29■□□□□ 0.04
SspnQ62147 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SspnQ62147 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
SspnQ62147 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.29■□□□□ 0.04
SspnQ62147 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.29■□□□□ 0.04
SspnQ62147 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SspnQ62147 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SspnQ62147 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.28■□□□□ 0.04
SspnQ62147 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SspnQ62147 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SspnQ62147 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.28■□□□□ 0.04
SspnQ62147 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.28■□□□□ 0.04
SspnQ62147 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.28■□□□□ 0.04
SspnQ62147 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.28■□□□□ 0.04
SspnQ62147 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.28■□□□□ 0.04
SspnQ62147 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SspnQ62147 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SspnQ62147 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SspnQ62147 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SspnQ62147 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SspnQ62147 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.27■□□□□ 0.04
SspnQ62147 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SspnQ62147 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SspnQ62147 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SspnQ62147 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
SspnQ62147 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms