Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hes3Q61657 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.82■□□□□ 0.12
Hes3Q61657 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.82■□□□□ 0.12
Hes3Q61657 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hes3Q61657 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Hes3Q61657 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.82■□□□□ 0.12
Hes3Q61657 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hes3Q61657 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.81■□□□□ 0.12
Hes3Q61657 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.81■□□□□ 0.12
Hes3Q61657 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Hes3Q61657 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.81■□□□□ 0.12
Hes3Q61657 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.81■□□□□ 0.12
Hes3Q61657 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Hes3Q61657 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hes3Q61657 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.8■□□□□ 0.12
Hes3Q61657 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Hes3Q61657 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.8■□□□□ 0.12
Hes3Q61657 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Hes3Q61657 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Hes3Q61657 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hes3Q61657 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Reep4-203ENSMUST00000226563 1444 ntBASIC15.79■□□□□ 0.12
Hes3Q61657 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Hes3Q61657 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.79■□□□□ 0.12
Hes3Q61657 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.79■□□□□ 0.12
Hes3Q61657 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hes3Q61657 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.79■□□□□ 0.12
Hes3Q61657 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Hes3Q61657 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hes3Q61657 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Hes3Q61657 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.78■□□□□ 0.12
Hes3Q61657 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Hes3Q61657 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hes3Q61657 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.78■□□□□ 0.12
Hes3Q61657 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.78■□□□□ 0.12
Hes3Q61657 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.78■□□□□ 0.12
Hes3Q61657 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms