Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Foxc1Q61572 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Foxc1Q61572 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Foxc1Q61572 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.37□□□□□ -0.27
Foxc1Q61572 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.37□□□□□ -0.27
Foxc1Q61572 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.37□□□□□ -0.27
Foxc1Q61572 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.37□□□□□ -0.27
Foxc1Q61572 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Foxc1Q61572 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Foxc1Q61572 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Foxc1Q61572 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Foxc1Q61572 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Foxc1Q61572 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.36□□□□□ -0.27
Foxc1Q61572 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.36□□□□□ -0.27
Foxc1Q61572 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.36□□□□□ -0.27
Foxc1Q61572 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.36□□□□□ -0.27
Foxc1Q61572 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Gm25007-201ENSMUST00000083808 133 ntBASIC13.36□□□□□ -0.27
Foxc1Q61572 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.36□□□□□ -0.27
Foxc1Q61572 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Foxc1Q61572 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Foxc1Q61572 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.35□□□□□ -0.27
Foxc1Q61572 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.35□□□□□ -0.27
Foxc1Q61572 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.35□□□□□ -0.27
Foxc1Q61572 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Foxc1Q61572 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Foxc1Q61572 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Foxc1Q61572 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Foxc1Q61572 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.34□□□□□ -0.27
Foxc1Q61572 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Foxc1Q61572 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Foxc1Q61572 Gm6420-201ENSMUST00000193885 723 ntBASIC13.34□□□□□ -0.27
Foxc1Q61572 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.34□□□□□ -0.27
Foxc1Q61572 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.34□□□□□ -0.27
Foxc1Q61572 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Foxc1Q61572 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Foxc1Q61572 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms