Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.68■□□□□ 0.1
Clns1aQ61189 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Clns1aQ61189 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clns1aQ61189 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Clns1aQ61189 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clns1aQ61189 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clns1aQ61189 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.67■□□□□ 0.1
Clns1aQ61189 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clns1aQ61189 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.67■□□□□ 0.1
Clns1aQ61189 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clns1aQ61189 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Clns1aQ61189 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clns1aQ61189 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Clns1aQ61189 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clns1aQ61189 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.66■□□□□ 0.1
Clns1aQ61189 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clns1aQ61189 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clns1aQ61189 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clns1aQ61189 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.65■□□□□ 0.1
Clns1aQ61189 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clns1aQ61189 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clns1aQ61189 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clns1aQ61189 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clns1aQ61189 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Clns1aQ61189 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Gm15820-201ENSMUST00000201566 728 ntBASIC15.64■□□□□ 0.09
Clns1aQ61189 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.64■□□□□ 0.09
Clns1aQ61189 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Clns1aQ61189 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Clns1aQ61189 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clns1aQ61189 Fst-202ENSMUST00000223640 2612 ntBASIC15.64■□□□□ 0.09
Clns1aQ61189 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Clns1aQ61189 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.63■□□□□ 0.09
Clns1aQ61189 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.63■□□□□ 0.09
Clns1aQ61189 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.63■□□□□ 0.09
Clns1aQ61189 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.63■□□□□ 0.09
Clns1aQ61189 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clns1aQ61189 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms