Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a4Q60857 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc6a4Q60857 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Gm10812-201ENSMUST00000099864 546 ntBASIC18.77■□□□□ 0.6
Slc6a4Q60857 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc6a4Q60857 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a4Q60857 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a4Q60857 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a4Q60857 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Slc6a4Q60857 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc6a4Q60857 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Mtag2-201ENSMUST00000058665 714 ntBASIC18.75■□□□□ 0.59
Slc6a4Q60857 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc6a4Q60857 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.74■□□□□ 0.59
Slc6a4Q60857 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Gm18666-201ENSMUST00000190039 958 ntBASIC18.74■□□□□ 0.59
Slc6a4Q60857 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Zfp783-201ENSMUST00000095946 670 ntBASIC18.74■□□□□ 0.59
Slc6a4Q60857 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc6a4Q60857 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.74■□□□□ 0.59
Slc6a4Q60857 Golph3-205ENSMUST00000228671 2842 ntBASIC18.73■□□□□ 0.59
Slc6a4Q60857 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Gm13158-201ENSMUST00000122007 736 ntBASIC18.73■□□□□ 0.59
Slc6a4Q60857 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Gm10698-201ENSMUST00000182663 604 ntBASIC18.73■□□□□ 0.59
Slc6a4Q60857 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.73■□□□□ 0.59
Slc6a4Q60857 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms