Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
ClpbQ60649 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ClpbQ60649 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.55■□□□□ 0.4
ClpbQ60649 Grk6-206ENSMUST00000224995 2971 ntBASIC17.55■□□□□ 0.4
ClpbQ60649 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpbQ60649 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpbQ60649 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.54■□□□□ 0.4
ClpbQ60649 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.54■□□□□ 0.4
ClpbQ60649 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.54■□□□□ 0.4
ClpbQ60649 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpbQ60649 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.54■□□□□ 0.4
ClpbQ60649 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.54■□□□□ 0.4
ClpbQ60649 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.54■□□□□ 0.4
ClpbQ60649 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpbQ60649 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.54■□□□□ 0.4
ClpbQ60649 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ClpbQ60649 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ClpbQ60649 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ClpbQ60649 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpbQ60649 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ClpbQ60649 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.53■□□□□ 0.4
ClpbQ60649 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ClpbQ60649 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ClpbQ60649 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
ClpbQ60649 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpbQ60649 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpbQ60649 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpbQ60649 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpbQ60649 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpbQ60649 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
ClpbQ60649 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ClpbQ60649 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ClpbQ60649 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
ClpbQ60649 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ClpbQ60649 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
ClpbQ60649 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ClpbQ60649 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ClpbQ60649 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpbQ60649 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
ClpbQ60649 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.51■□□□□ 0.39
ClpbQ60649 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.51■□□□□ 0.39
ClpbQ60649 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
ClpbQ60649 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpbQ60649 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpbQ60649 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ClpbQ60649 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
ClpbQ60649 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpbQ60649 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ClpbQ60649 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ClpbQ60649 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.5■□□□□ 0.39
ClpbQ60649 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.5■□□□□ 0.39
ClpbQ60649 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.5■□□□□ 0.39
ClpbQ60649 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
ClpbQ60649 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ClpbQ60649 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ClpbQ60649 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ClpbQ60649 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.49■□□□□ 0.39
ClpbQ60649 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ClpbQ60649 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms