Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.46■□□□□ 0.39
Nr1h4Q60641 Mir7075-201ENSMUST00000184187 82 ntBASIC17.46■□□□□ 0.39
Nr1h4Q60641 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1h4Q60641 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Nr1h4Q60641 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nr1h4Q60641 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nr1h4Q60641 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Gm13241-201ENSMUST00000094493 780 ntBASIC17.45■□□□□ 0.38
Nr1h4Q60641 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1h4Q60641 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1h4Q60641 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.43■□□□□ 0.38
Nr1h4Q60641 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nr1h4Q60641 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1h4Q60641 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Gm43173-201ENSMUST00000202246 593 ntBASIC17.42■□□□□ 0.38
Nr1h4Q60641 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Nr1h4Q60641 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Gm8493-201ENSMUST00000196881 489 ntBASIC17.41■□□□□ 0.38
Nr1h4Q60641 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.41■□□□□ 0.38
Nr1h4Q60641 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nr1h4Q60641 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nr1h4Q60641 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms