Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrcc1Q60596 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrcc1Q60596 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Xrcc1Q60596 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Xrcc1Q60596 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.51■□□□□ 0.39
Xrcc1Q60596 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Xrcc1Q60596 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.5■□□□□ 0.39
Xrcc1Q60596 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.5■□□□□ 0.39
Xrcc1Q60596 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Golph3-205ENSMUST00000228671 2842 ntBASIC17.5■□□□□ 0.39
Xrcc1Q60596 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.5■□□□□ 0.39
Xrcc1Q60596 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Xrcc1Q60596 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.49■□□□□ 0.39
Xrcc1Q60596 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.49■□□□□ 0.39
Xrcc1Q60596 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.49■□□□□ 0.39
Xrcc1Q60596 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Xrcc1Q60596 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.48■□□□□ 0.39
Xrcc1Q60596 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.48■□□□□ 0.39
Xrcc1Q60596 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Xrcc1Q60596 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.47■□□□□ 0.39
Xrcc1Q60596 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Xrcc1Q60596 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Gm22325-201ENSMUST00000158904 308 ntBASIC17.46■□□□□ 0.39
Xrcc1Q60596 Gm44549-201ENSMUST00000208351 577 ntBASIC17.46■□□□□ 0.39
Xrcc1Q60596 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Xrcc1Q60596 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms