Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.36■□□□□ 0.53
Pabpn1lQ5XFR0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Gm22238-201ENSMUST00000175222 88 ntBASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pabpn1lQ5XFR0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.34■□□□□ 0.53
Pabpn1lQ5XFR0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pabpn1lQ5XFR0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pabpn1lQ5XFR0 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.33■□□□□ 0.52
Pabpn1lQ5XFR0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pabpn1lQ5XFR0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pabpn1lQ5XFR0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pabpn1lQ5XFR0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pabpn1lQ5XFR0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.32■□□□□ 0.52
Pabpn1lQ5XFR0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pabpn1lQ5XFR0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms