Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ubr3Q5U430 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ubr3Q5U430 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.51■■□□□ 1.19
Ubr3Q5U430 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.5■■□□□ 1.19
Ubr3Q5U430 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC22.5■■□□□ 1.19
Ubr3Q5U430 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Gm4217-201ENSMUST00000182243 1002 ntBASIC22.5■■□□□ 1.19
Ubr3Q5U430 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ubr3Q5U430 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.49■■□□□ 1.19
Ubr3Q5U430 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ubr3Q5U430 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ubr3Q5U430 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC22.47■■□□□ 1.19
Ubr3Q5U430 AC159205.3-201ENSMUST00000224614 874 ntBASIC22.47■■□□□ 1.19
Ubr3Q5U430 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubr3Q5U430 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubr3Q5U430 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.45■■□□□ 1.19
Ubr3Q5U430 Gm14859-201ENSMUST00000117752 357 ntBASIC22.45■■□□□ 1.19
Ubr3Q5U430 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ubr3Q5U430 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC22.45■■□□□ 1.19
Ubr3Q5U430 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Ubr3Q5U430 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ubr3Q5U430 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Ubr3Q5U430 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr3Q5U430 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
Ubr3Q5U430 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ubr3Q5U430 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ubr3Q5U430 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ubr3Q5U430 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr3Q5U430 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Mir5130-201ENSMUST00000175160 84 ntBASIC22.42■■□□□ 1.18
Ubr3Q5U430 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Ubr3Q5U430 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms