Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.44■□□□□ 0.7
Ctc1Q5SUQ9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Gm10252-201ENSMUST00000209541 832 ntBASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ctc1Q5SUQ9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ctc1Q5SUQ9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Gm6420-201ENSMUST00000193885 723 ntBASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Gm20049-201ENSMUST00000219950 730 ntBASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.41■□□□□ 0.7
Ctc1Q5SUQ9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Gm13534-201ENSMUST00000121169 513 ntBASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Gm13168-201ENSMUST00000121771 632 ntBASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Gm6211-202ENSMUST00000167849 925 ntBASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ctc1Q5SUQ9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ctc1Q5SUQ9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ctc1Q5SUQ9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.39■□□□□ 0.69
Ctc1Q5SUQ9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ctc1Q5SUQ9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ctc1Q5SUQ9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms