Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav3-3Q5R1C3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Haglr-201ENSMUST00000100000 2085 ntBASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Gm7143-201ENSMUST00000222811 859 ntBASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav3-3Q5R1C3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav3-3Q5R1C3 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav3-3Q5R1C3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav3-3Q5R1C3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms