Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-2Q5R1B6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Gm33142-201ENSMUST00000193913 867 ntBASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Gm45058-201ENSMUST00000205810 766 ntBASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Gm18032-201ENSMUST00000222541 538 ntBASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-2Q5R1B6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Gm6345-202ENSMUST00000180900 204 ntBASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-2Q5R1B6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Trav8d-2Q5R1B6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-2Q5R1B6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav8d-2Q5R1B6 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Trav8d-2Q5R1B6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Gm14859-201ENSMUST00000117752 357 ntBASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Mir5130-201ENSMUST00000175160 84 ntBASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav8d-2Q5R1B6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms